MB Screenshots
Click on an image to see a larger version.
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Program's Control Panel
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| You can manage your analysis from this panel |
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Restriction analysis
You can easily analyze huge DNA sequences and create vector or linear DNA maps
Your reports can be exported to Excel or HTML
See example of html report created by MB
You can also adjust which parts of your report should be saved to the file.
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| Plasmid map |
Linear DNA map |
Restriction map |
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| Report file |
An extra window contains explanations to the DNA map |
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Amino acid analysis
It is possible to display an amino acid sequence and to make a prediction
of protein structure for small peptids.
You can also extract the DNA sequence of any ORF which was found.
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| Report file |
Translation for the detected ORFs |
3D structure estimation |
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Sequence alignment
Multiple sequence alignment uses method of hierarchical clustering
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| Multiple Sequence Alignment |
Phylogenetic Tree |
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Dotplot
Dotplot has two available algorithms: windows/stringency
parameters and minimal length of an alignment
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| Dotplot Graph |
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Primer design tool
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| With this utility you can design primers for PCR |
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Alpha-Helix analysis tool
With this plugin it is possible to analyze alpha helices
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| MB can draw the helix |
The program can plot the hydrophobicity graph too |
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Open reading frames search
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| Searches for sense/antisense frames with different lengths |
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Extra features
Other features which are included in the latest version
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| Isoelectric point calculation |
Mol. weight calculation for DNA |
Amino acids visualization |
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| Web browser |
"Read Aloud"-feature |
Automatic update feature |
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Options and databases
The latest version provides easily-to-manage restriction database (latest version from REBASE) with ability to create your own restriction profiles
It is possible to select from 4 different groups of enzymes: 4-cutters,
6-cutters, 6-cutters with precise sequence, 8+ -cutters
DNA/amino acids database was also improved. You can open and edit
the sequences by clicking "Open sequence"-button
Sequence editor features run-time translation into three frames and ability
to select and clone peptides/corresponding DNA sequence
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| Options window |
Restriction database manager |
DNA and amino seq database |
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| Sequence editor |
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